Papers

• Adam Kowalczyk, Justin Bedo, Thomas Conway, and Bryan Beresford-Smith, The Poisson Margin Test for Normalisation Free Significance Analysis of NGS Data.  Journal of Computational Biology.  To appear.
• Adam Kowalczyk, Justin Bedo, Thomas Conway, and Bryan Beresford-Smith, The Poisson Margin Test for Normalisation Free Significance Analysis of NGS Data. 
  Lecture Notes in Computer Science, 2010, Volume 6044/2010, 297–309, DOI: 10.1007/978-3-642-12683-3_19.
• Noel G. Faux, Craig W. Ritchie, Adam Gunn, Alan Rembach, Andrew Tsatsanis, Justin Bedo, John Harrison, Lars Lannfelt, Kaj Blennow, Henrik Zetterberg, Martin Ingelsson, Colin L. Masters, Rudolph E. Tanzi, Jeffrey L. Cummings, Caroline M. Herd, Ashley I. Bush. PBT2 Rapidly Improves Cognition in Alzheimer's Disease: Additional Phase II Analyses.  Journal of Alzheimer's Disease 2010 vol. 20 (2).
• Victor Villemagne, Keyla Perez, Kerryn Pike, W Kok, Christopher Rowe, Anthony White, Pierrick Bourgeat, Olivier Salvado, Justin Bedo, Craig Hutton, Noel Faux, Colin Masters, Kevin Barnham. Blood borne Aβ dimer correlates with clinical markers of Alzheimer's disease. Journal of Neuroscience 2010 vol. 30(18), pp. 6315–6322.
• Justin Bedo.  Microarray Design using the Hilbert-Schmidt Independence Criterion. Proceedings of PRIB 2008.
• Justin Bedo, Peter Wenzl, Adam Kowalczyk, Andrzej Kilian.  Precision-mapping and statistical validation of quantitative trait loci by machine learning.  BMC Genetics 2008 vol. 9 (1) pp. 35.
• T. B. Anderson, S. D. Dods, K. Clarke, J. Bedo, and A. Kowalczyk. Multi-impairment monitoring for photonic networks. IET Seminar Digests  2007.
• Brian Parker, Simon Guenter, Justin Bedo. Stratification bias in low signal microarray studies. BMC Bioinformatics 2007 vol. 8 (1) pp. 326.
• Adam Kowalczyk, Danielle Greenawalt, Justin Bedo, Cuong Duong, Garvesh Raskutti, Robert Thomas, and Wayne Phillips.  Large Validation of Anti-learnable Signature in Classification of Response to Chemoradiotherapy in Esophageal Adenocarcinoma Patients.  Optimization and systems biology 2007, pp. 213–221.
• Le Song, Justin Bedo, Karsten Borgwardt, Arthur Gretton, and Alex Smola.  Gene selection via the BAHSIC family of algorithms.  Bioinformatics 2007, pp. 490–408. 
• Le Song, Alex Smola, Arthur Gretton, Karsten Borgwardt, and Justin Bedo.  Supervised Feature Selection via Dependence Estimation. Machine Learning 2007, pp. 823–830.
• Justin Bedo, Conrad Sanderson, and Adam Kowalczyk.  An efficient alternative to SVM based recursive feature elimination with applications in natural language processing and bioinformatics.  Proceedings of the Australian Join Conference of Artificial Intelligence 2006, 170–180.

 Posters

• Justin Bedo, Albin Steininger, Izhak Haviv, and Adam Kowalczyk. DNA Annotation Induction: from RefGene on Human Chr. 22 to Genome-wide CAGE for Human and Mouse.
• Justin Bedo and Adam Kowalczyk. Genome Annotation Test for Evaluation of CHiP-Seq Peaks.
• Adam Kowalczyk, Justin Bedo, Tom Conway, and Bryan Beresford-Smith. Poisson Margin Test for Normalisation Free Significance Analysis of NGS Data.